RNA STRAND v2.0 - The RNA secondary STRucture and statistical ANalysis Database

General features for molecule NDB_00026 (click to expand/contract all tables) Format: CT RNAML Bpseq Dot-parentheses FASTA Molecule ID [?]: NDB_00026 Molecule name [?]: NDB id ddf007 Source [?]: Nucleic Acid Database Source ID [?]: ddf007 Reference [?]: A.H.-J.Wang, G.Ughetto, G.J.Quigley, T.Hakoshima, G.A.Van Der Marel, J.H.Van Boom, A.Rich. The Molecular Structure of a DNA-Triostin a Complex. Science V. 225 1115 1984 ASTM SCIEAS US ISSN 0036-8075 0038 Type [?]: Unknown [?]     PS figure     PDF figure Figure from original source Organism [?]: N/A Validated by NMR or X-Ray [?]: Yes Method for secondary structure determination [?]: X-Ray; ran through RNAview Number of molecules [?]: 2 Length [?]: 12 Fragments used [?]: No Duplicated sequence [?]: Molecules in the database with the same sequence: NDB_00073 Number of domains [?]: 1 Number of unpaired bases [?]: 0 Number of paired bases [?]: 12

Click on any header below for additional features.

Stem features Number of stems [?]: 1 Number of base pairs in stems [?]: 6 Maximum length of a stem [?]: 6 Average length of a stem [?]: 6 Minimum length of a stem [?]: 6 Maximum estimated free energy [?]: -10.5 Average estimated free energy [?]: -10.5 Minimum estimated free energy [?]: -10.5

Hairpin loop features Number of hairpin loops [?]: 1 Maximum number of free bases in hairpin loops [?]: 0 Average number of free bases in hairpin loops [?]: 0 Minimum number of free bases in hairpin loop [?]: 0

Bulge loop features Number of bulge loops [?]: 0 Maximum number of free bases in bulge loops [?]: N/A Average number of free bases in bulge loops [?]: N/A Minimum number of free bases in bulge loop [?]: N/A

Internal loop features

Multi-loop features

Non-canonical base pairs features Total number of non-canonical base pairs [?]: 0

Pseudoknot features

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